CDS

Accession Number TCMCG005C24611
gbkey CDS
Protein Id XP_020273835.1
Location join(73091808..73091956,73092025..73092193,73093206..73093302,73093385..73093511,73093589..73093704,73094395..73094489,73094565..73094716,73097390..73097447,73097541..73097648,73097958..73098207,73101552..73101736,73103384..73103479,73106717..73106865,73107788..73107890,73108005..73108049,73109252..73109416,73109780..73109854,73109979..73110071)
Gene LOC109848634
GeneID 109848634
Organism Asparagus officinalis

Protein

Length 743aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA376608;
db_source XM_020418246.1
Definition LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 2

EGGNOG-MAPPER Annotation

COG_category A
Description Cleavage and polyadenylation specificity factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14402        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03015        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005847        [VIEW IN EMBL-EBI]
GO:0005849        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006378        [VIEW IN EMBL-EBI]
GO:0006379        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031124        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043631        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGACCTCAGTTCAAGTCACTCCTCTCTCCGGCGTCTACAACGAGAACCCCCTCTGCTACCTCCTCTCCGTCGACGGCTTCAACTTCCTAATGGACTGCGGCTGGAACGATCAGTTCGATGTCAATCTCCTCCAACCCCTCTCCAGGGTGGCCTCCAAGATCGATGCGGTTCTGATATCACATTCAGATATACTTCATGTTGGGGCTCTGCCGTATGCGATGAGGAAGCTGGGGCTGTCTGCGCCAGTGTATTCGACGGACCCCGTGTGTAGCCTCGGGCAGCTGACGATGTATGATTACTACGCCGCTCGCAGGCAAGTTTCAGATTTCAACTTATTCACCATGGACGATATTGATTCTGCCTTCCAAAACATTACGAGGCTGAGATACTCCCAAAACCATCATATCTCTGATAAAGGAGAGGGAATCGTCATAGCTCCTCATGTCGCAGGCCATCTTCTGGGAGGTACCGTCTGGAAGATAACGAAAGATGGAGAAGATGTTGTGTATGCTGTTGACTTCAACCATCGGAAAGAACGGCACTTGAATGGAACTGTCCTTGAATCTTTTGTCCGGCCTGCTGTTCTGATAACAGATGCTTACAATGCTTTAAACAATCAAGTTTACAAACGTCAAAGGGACCAAGAGTTTCTTGATGTAATCCTGAAGGCTTTGAGGGCAGATGGAAATGTATTGCTTCCTGTTGATACAGCCGGAAGAGCCCTGGAACTTATATTGATACTAGAACAGTATTGGGCACAGGAACGTTTGACTTACCCAATCTTCTTTCTGACAAATGTGTCCTCAAGCACCCTTAAGTATGTCATGAGTTCTCTTGAGTGGATGAGTGACTCTATTGCAAATTCTTTTGAGCATTCACGTAACAATGCTTTTCAATTGAGGTATGTAGATCTCAAAATCAACAAGAGTGATCTTGAGAAATCACCTGAAGGTCCAAAGGTGGTTCTAGCATCAATGGCCAGTCTGGAGTTCGGATCCTCTCATGATTTATTTGTGGAATGGGCAACAGAAGCAAAGAATTTGGTTTTGTTTACCGAAAAAGGCCAGTTTGGGACGTTGGCTCGTATGCTTCAAGTGGATCCACCCCCCAAAGCTGTGAAAGTTACAATGAGTAAAAGGATCCCTTTAGTTGGGGATGAGTTAAAAGCCTATGAAGAGGAACAAGAACGAATCAAGCAAGAAGAAGCTCTAAAAGTCACCCTTATCAAGGAGGAGGAACAAAGAACATCTCATGGGGATGCTAATGTAGGTGACCCCATGGTGATTGATGCTACCTCGTCTCAAACTGCAACCGATGTGGCTACCTCACGCTTTGGTGGAAATCGTGACATTCTCATTGATGGGTTCATTCCTTCAGCAACCAGTGTTGCTCCGATGTTTCCATTTTACGAAAACTCTGCTGAATGGGATGACTATGGTGAGATTATCAATCCTGATGACTACATAACTAAGGATGAAGACATGGATCAGCCATCTGCGCAAGGTATAGGAGGTGATCTGGCTGGTAAACTTGATGAAGTCTCAGCTCAGTTGCTCCTTGATTCAACACCTTCTAAAGTTGTTTCAAATGAAGTCACTGTCCAAGTGAAGTGTGCACTGGTACACATGGACTTTGAAGGGCGGTCTGATGGGCGGTCTGTTAAATCAATCTTAGCGCATGTTGCTCCCCTGAAGCTTGTATGTACCTAAAACAACGGAAAATATAAAACTTGACTATATTTCATGTTGTATTGGTNNNNNNNNNNCTGTTTGAAGCATGTTTGTCCCCATGTTTATGCTCCACAAATTGAAGAACCCATTGATGTAACTTCTGATTTATGTGCATACAAGGTTCAGCTTTCTGAGAAACTAATGAGCAATGTTCTCTTCAAGAAGCTTGGTGAATATGAGATTGCTTGGATTGATGCTGAAGTAGGAAACACTAATGACATGCTTTCTCTGCTTCCTCTCTCATCAAAACCTCCGCCGCACGATTCAGTACTCGTCGGAGATTTGAAGCTGGCTGATTTCAAGCAATTTCTTGCAAGCAAAGACATTCAGGTAGAATTTGCTGGGGGTGTTCTGCGTTGTGGTGAGTATGTCACCCTTCGGAAAGTTAGCAATCCCAGCCAGAAGGCTGGTGCTCAACAAGTGGTTATTGAAGGACCTCTGACAGAAGAATATTACAGAATCAGAGACCTTCTCTATTCACAGTTTTATTTACTGTAG
Protein:  
MGTSVQVTPLSGVYNENPLCYLLSVDGFNFLMDCGWNDQFDVNLLQPLSRVASKIDAVLISHSDILHVGALPYAMRKLGLSAPVYSTDPVCSLGQLTMYDYYAARRQVSDFNLFTMDDIDSAFQNITRLRYSQNHHISDKGEGIVIAPHVAGHLLGGTVWKITKDGEDVVYAVDFNHRKERHLNGTVLESFVRPAVLITDAYNALNNQVYKRQRDQEFLDVILKALRADGNVLLPVDTAGRALELILILEQYWAQERLTYPIFFLTNVSSSTLKYVMSSLEWMSDSIANSFEHSRNNAFQLRYVDLKINKSDLEKSPEGPKVVLASMASLEFGSSHDLFVEWATEAKNLVLFTEKGQFGTLARMLQVDPPPKAVKVTMSKRIPLVGDELKAYEEEQERIKQEEALKVTLIKEEEQRTSHGDANVGDPMVIDATSSQTATDVATSRFGGNRDILIDGFIPSATSVAPMFPFYENSAEWDDYGEIINPDDYITKDEDMDQPSAQGIGGDLAGKLDEVSAQLLLDSTPSKVVSNEVTVQVKCALVHMDFEGRSDGRSVKSILAHVAPLKLVCTXNNGKYKTXLYFMLYWXXXXCLKHVCPHVYAPQIEEPIDVTSDLCAYKVQLSEKLMSNVLFKKLGEYEIAWIDAEVGNTNDMLSLLPLSSKPPPHDSVLVGDLKLADFKQFLASKDIQVEFAGGVLRCGEYVTLRKVSNPSQKAGAQQVVIEGPLTEEYYRIRDLLYSQFYLL